office: Life Science Bldg 3205
E&S SCI M216 | EE BIOL M200A - Evolutionary Biology
EE BIOL 19 - Fiat Lux Freshman Seminars
EE BIOL 194B - Research Group or Internship Seminars: Ecology and Evolutionary Biology
I am interested in understanding how biological diversity originates and evolves. My research is focused on three inter-related and overlapping topics: i) the discovery and description of biological diversity, ii) the reconstruction of the evolutionary histories of genes, species, and clades, and c) the evaluation of ecological and evolutionary hypotheses to study what factors allow and promote genetic, species, and phenotypic diversity.
Current research areas include: systematic biology, plant biology, statistical phylogenetics, quantitative taxonomy, macroevolution, bio- and phylogeography, computational biology, phylogenetic comparative functional genomics, adaptation, speciation, and tropical biology
To learn more about my research, visit my lab website http://zapatalab.org
Guang A, Zapata F, Howison M, Dunn CW, "An integrated perspective on phylogenetic workflows", Trends in Ecology & Evolution, 31 : 116-126 (2016) .
Zapata F. Escallonia. Bernal R, Gradstein SR, Celis
M (eds.), "Catalogo de plantas y liquenes de Colombia", Trends in Ecology & Evolution, Universidad Nacional de Colombia, Bogota Instituto de Ciencias Naturales 31 : - (2015) [link].
Siebert S, Goetz FE, Church SH, Bhattacharyya P, Zapata F, Haddock SHD, Dunn CW., "Stem cells in N anomia bijuga (Siphonophora), a colonial animal with localized growth zones", EvoDevo, 6 : 22- (2015) .
Zapata F, Goetz, FE, Smith SA, Howison M, Siebert S, Church SH, Sanders SM, Ames CL, McFadden CS, France SC, Daly M, Collins AG, Haddock SHD, Dunn CW, Cartwright P, "Phylogenomic analyses support traditional relationships within Cnidaria", PLOS ONE, 10 : e0139068- (2015) .
Howison M, Zapata F, Edwards EJ, Dunn CW, "Bayesian genome assembly and assessment by
Markov Chain Monte Carlo sampling", PLOS ONE, 9 : e99497- (2014) [link].
Fine PVA, Zapata F, Daly DC, "Investigating processes of Neotropical rain forest tree diversification
by examining the evolution and historical biogeography of the Protieae (Burseraceae)", Evolution, 68 : 1988-2004 (2014) [link].
Zapata F, Wilson N, Howison M, Andrade SCS, Jorger K, Schrodl M, Goetz F, Giribet G, Dunn CW, "Phylogenomic analyses of deep gastropod relationships reject Orthogastropoda", Proceedings of the Royal Society-B, 281: : 20141739- (2014) .
Weeks A, Zapata F, Pell SK, Daly DC, Mitchell J, Fine PVA, "To move or to evolve: contrasting patterns of intercontinental connectivity and climatic niche evolution in the Terebinthaceae (Anacardiaceae and Burseraceae)", Frontiers in Genetics - Evolutionary and Population Genetics, 5 : 409- (2014) .
Dunn CW, Howison M, Zapata F, "Agalma: an automated phylogenomics workflow", BMC
Bioinformatics, 14 : 330- (2013) [link].
Howison M, Zapata F, Dunn CW., "Toward a statistically explicit understanding of de novo sequence
assembly", Bioinformatics, 29 : 2959-2963 (2013) [link].